BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB027H12LP1|AL428814
(882 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1083 1735 0.0
>3x_Contig1083
Length = 2993
Score = 1735 bits (875), Expect = 0.0
Identities = 882/883 (99%), Gaps = 1/883 (0%)
Strand = Plus / Plus
Query: 1 gatctgattagttggtgacttcatcaagaattcttttctacaggccgtgataatcgggct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 703 gatctgattagttggtgacttcatcaagaattcttttctacaggccgtgataatcgggct 762
Query: 61 tacggtggaaaccgtagccaaagctagagtctattgtggaataacaacgtctgtctgccg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 763 tacggtggaaaccgtagccaaagctagagtctattgtggaataacaacgtctgtctgccg 822
Query: 121 ggccttcagatgaagacagatcggtagtggcattccagtccaaatgtagatttaacgtta 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 823 ggccttcagatgaagacagatcggtagtggcattccagtccaaatgtagatttaacgtta 882
Query: 181 ccgaatgaatagcacttcgttacgcaattaacagagaagtggcgtaatgccaggaatttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 883 ccgaatgaatagcacttcgttacgcaattaacagagaagtggcgtaatgccaggaatttt 942
Query: 241 ctttgtgcacatcgaaatcaaattaacggtatactgggttttacttattcactaacattt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 943 ctttgtgcacatcgaaatcaaattaacggtatactgggttttacttattcactaacattt 1002
Query: 301 cattcattccactgtatgagagagatcttaggagaatatgcggatgagactaaattgaca 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1003 cattcattccactgtatgagagagatcttaggagaatatgcggatgagactaaattgaca 1062
Query: 361 ccaaactcacgccgaatatagtgtttcctggcaggagtggttcgttacggtattacgcac 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1063 ccaaactcacgccgaatatagtgtttcctggcaggagtggttcgttacggtattacgcac 1122
Query: 421 cccatttgaggagtgtaataggcagaacttaatcctcccacttactaaactaagctgcac 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1123 cccatttgaggagtgtaataggcagaacttaatcctcccacttactaaactaagctgcac 1182
Query: 481 tgctaccattactactactgaccagacatcttccgagcgagagattaacatgtacgttgt 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1183 tgctaccattactactactgaccagacatcttccgagcgagagattaacatgtacgttgt 1242
Query: 541 ttgttcctggaaattggtgtggaagagcacagaaaacagatctttttttctttttttcat 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1243 ttgttcctggaaattggtgtggaagagcacagaaaacagatctttttttctttttttcat 1302
Query: 601 tttccatttttttccattcttcctctttcgagggtaggagggttcttctggtatcgactg 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1303 tttccatttttttccattcttcctctttcgagggtaggagggttcttctggtatcgactg 1362
Query: 661 gaaataagtggtaacaagtacggagaggtgggaa-catggtgagaatacagagcagatag 719
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 1363 gaaataagtggtaacaagtacggagaggtgggaaccatggtgagaatacagagcagatag 1422
Query: 720 gaagagtaaatagatgagaatatcaccattatatggcattatgatactattacccttttg 779
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1423 gaagagtaaatagatgagaatatcaccattatatggcattatgatactattacccttttg 1482
Query: 780 ggaaataatttcttctagtagaaaattttgacagccgaagtatgaaaaaaaggaaaaaga 839
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1483 ggaaataatttcttctagtagaaaattttgacagccgaagtatgaaaaaaaggaaaaaga 1542
Query: 840 gtagtactcttcggcccgactgggagataattcttgacaaatt 882
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1543 gtagtactcttcggcccgactgggagataattcttgacaaatt 1585
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7533
Number of Sequences: 1807
Number of extensions: 7533
Number of successful extensions: 129
Number of sequences better than 1.0e-20: 1
length of query: 882
length of database: 10,358,551
effective HSP length: 16
effective length of query: 866
effective length of database: 10,329,639
effective search space: 8945467374
effective search space used: 8945467374
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 50 (99.6 bits)